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Eyes Microcirculation Dataset

96211367
Tagmedical
Taskinstance segmentation
Release YearMade in 2022
Licenseunknown

Summary #

Dataset LinkHomepage

Eyes Microcirculation: Medicine Dataset for Eyes Semantic Segmentation Task is a dataset for instance segmentation, semantic segmentation, and object detection tasks. Possible applications of the dataset could be in the medical industry.

The dataset consists of 962 images with 4277 labeled objects belonging to 1 single class (vessel).

Images in the Eyes Microcirculation dataset have pixel-level instance segmentation annotations. Due to the nature of the instance segmentation task, it can be automatically transformed into a semantic segmentation (only one mask for every class) or object detection (bounding boxes for every object) tasks. There are 313 (33% of the total) unlabeled images (i.e. without annotations). There are 2 splits in the dataset: train (655 images) and test (307 images). The dataset was released in 2022.

Dataset Poster

Explore #

Eyes Microcirculation dataset has 962 images. Click on one of the examples below or open "Explore" tool anytime you need to view dataset images with annotations. This tool has extended visualization capabilities like zoom, translation, objects table, custom filters and more. Hover the mouse over the images to hide or show annotations.

OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
OpenSample annotation mask from Eyes MicrocirculationSample image from Eyes Microcirculation
πŸ‘€
Have a look at 962 images
Because of dataset's license preview is limited to 12 images
View images along with annotations and tags, search and filter by various parameters

Class balance #

There are 1 annotation classes in the dataset. Find the general statistics and balances for every class in the table below. Click any row to preview images that have labels of the selected class. Sort by column to find the most rare or prevalent classes.

Search
Rows 1-1 of 1
Class
γ…€
Images
γ…€
Objects
γ…€
Count on image
average
Area on image
average
vesselβž”
mask
649
4277
6.59
1.41%

Images #

Explore every single image in the dataset with respect to the number of annotations of each class it has. Click a row to preview selected image. Sort by any column to find anomalies and edge cases. Use horizontal scroll if the table has many columns for a large number of classes in the dataset.

Object distribution #

Interactive heatmap chart for every class with object distribution shows how many images are in the dataset with a certain number of objects of a specific class. Users can click cell and see the list of all corresponding images.

Class sizes #

The table below gives various size properties of objects for every class. Click a row to see the image with annotations of the selected class. Sort columns to find classes with the smallest or largest objects or understand the size differences between classes.

Search
Rows 1-1 of 1
Class
Object count
Avg area
Max area
Min area
Min height
Min height
Max height
Max height
Avg height
Avg height
Min width
Min width
Max width
Max width
vessel
mask
4277
0.21%
7.09%
0%
3px
0.24%
935px
75.89%
162px
13.14%
3px
0.18%
1422px
87.56%

Spatial Heatmap #

The heatmaps below give the spatial distributions of all objects for every class. These visualizations provide insights into the most probable and rare object locations on the image. It helps analyze objects' placements in a dataset.

Spatial Heatmap

Objects #

Table contains all 4277 objects. Click a row to preview an image with annotations, and use search or pagination to navigate. Sort columns to find outliers in the dataset.

Search
Rows 1-10 of 4277
Object ID
γ…€
Class
γ…€
Image name
click row to open
Image size
height x width
Height
γ…€
Height
γ…€
Width
γ…€
Width
γ…€
Area
γ…€
1βž”
vessel
mask
530.png
1232 x 1624
286px
23.21%
356px
21.92%
0.16%
2βž”
vessel
mask
530.png
1232 x 1624
40px
3.25%
86px
5.3%
0.03%
3βž”
vessel
mask
530.png
1232 x 1624
666px
54.06%
634px
39.04%
1.15%
4βž”
vessel
mask
530.png
1232 x 1624
187px
15.18%
74px
4.56%
0.04%
5βž”
vessel
mask
708.png
1232 x 1624
186px
15.1%
305px
18.78%
0.12%
6βž”
vessel
mask
708.png
1232 x 1624
34px
2.76%
23px
1.42%
0.01%
7βž”
vessel
mask
708.png
1232 x 1624
243px
19.72%
300px
18.47%
0.17%
8βž”
vessel
mask
708.png
1232 x 1624
602px
48.86%
768px
47.29%
0.86%
9βž”
vessel
mask
228.png
1232 x 1624
227px
18.43%
153px
9.42%
0.08%
10βž”
vessel
mask
228.png
1232 x 1624
283px
22.97%
366px
22.54%
0.24%

License #

License is unknown for the Eyes Microcirculation: Medicine Dataset for Eyes Semantic Segmentation Task dataset.

Citation #

If you make use of the Eyes Microcirculation data, please cite the following reference:

@dataset{Eyes Microcirculation,
  author={},
  title={Eyes Microcirculation: Medicine Dataset for Eyes Semantic Segmentation Task},
  year={2022},
  url={https://www.kaggle.com/datasets/b11gden/microcirculation}
}

Source

If you are happy with Dataset Ninja and use provided visualizations and tools in your work, please cite us:

@misc{ visualization-tools-for-eyes-microcirculation-dataset,
  title = { Visualization Tools for Eyes Microcirculation Dataset },
  type = { Computer Vision Tools },
  author = { Dataset Ninja },
  howpublished = { \url{ https://datasetninja.com/eyes-microcirculation } },
  url = { https://datasetninja.com/eyes-microcirculation },
  journal = { Dataset Ninja },
  publisher = { Dataset Ninja },
  year = { 2024 },
  month = { feb },
  note = { visited on 2024-02-24 },
}

Download #

Please visit dataset homepage to download the data.

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